Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820552.1_cds_XP_016500447.1_14272
CDS Infomation

[gene=LOC107818889] [db_xref=GeneID:107818889] [protein=shikimate kinase, chloroplastic-like] [protein_id=XP_016500447.1] [location=complement(join(4683..4736,4973..5034,5207..5285,5379..5508,5616..5698,6967..7054,7283..7355,7510..7564,8499..8557,11291..11498))] [gbkey=CDS]
Sequence

ATGGAGGCTAGAGTTTCGCAGAGCCTTCAGTTGTCGTCATGGATTAAATCGGATAAGGTA
GTAAGGAAACCCGGTGGTTGCTTGCGTTTCTCTGTGAAATGGAATGAAAAACTGATGCAT
CGTACAGTCATATCCTGCCATTTACAGCCTAGAAAAGCTAATAGACGAGTAGCATTGAAG
GTTTCATGTTCTTCTCATAATGTTCAAGCTTCAGTTCTGGAGTCTGAATGTATTACTGCA
TCAACTGATGAAATCGAGACATTGAAGAATAAATCAGAAGAGGTTGAAGAATATCTAGAT
GGACGATGTATTTACCTCGTTGGAATGATGGGCTCAGGCAAAACAACTGTGGGCCGGATT
TTGGCAGAAACACTGGGATATTCCTTTTTTGACTGTGATAGGCTGATAGAGCAGGCTGTT
GGTGGAACTACTGTAGCTGAAATCTTCAAGCTCCATGGAGAGAGCTTCTTTAGGGACAAT
GAGACGGAGGTATTGCACAAGTTGTCTGCGATGCATCGGCTTGTTGTTTCAACAGGTGGA
GGTGCAGTTGTTCGTCCCATTAATTGGAGACATATGCACAAGGGTATTAGTGTTTGGTTA
GATGTTCCTTTAGATGCTTTGGCCAAGAGAATTACTGCTGAAGGAACTAAATCTCGCCCC
CTATTACATGAAGAATCAGGAGACATTTATGATAAGACTTTGAAGCGGTTAACTACTTTA
ATGGAGACAAGGGGTGCAAATTATGCCAATGCAAGTGCCAGGGTTTCACTAGAAAATATT
GCAGTGAAAAAGGGAAAAGATGTCTGCCATATTACACCTACTGAAATTACTCTAGAGGTT
CTTATACAAATTGAGAACTTAAAGAAACAAGAGAGCGTAGTTGTGCTATAA

Peptide Sequence

PEP ID

XP_016500447.1
PEP Infomation

PREDICTED: shikimate kinase, chloroplastic-like [Nicotiana tabacum]
Sequence

MEARVSQSLQLSSWIKSDKVVRKPGGCLRFSVKWNEKLMHRTVISCHLQPRKANRRVALK
VSCSSHNVQASVLESECITASTDEIETLKNKSEEVEEYLDGRCIYLVGMMGSGKTTVGRI
LAETLGYSFFDCDRLIEQAVGGTTVAEIFKLHGESFFRDNETEVLHKLSAMHRLVVSTGG
GAVVRPINWRHMHKGISVWLDVPLDALAKRITAEGTKSRPLLHEESGDIYDKTLKRLTTL
METRGANYANASARVSLENIAVKKGKDVCHITPTEITLEVLIQIENLKKQESVVVL

Transcript Sequence

Gene sequence data has not been registered.